RNATOPS-W: A Web Server for RNA Pseudoknot Search

RNATOPS-W is a web server of the program RNATOPS (based on its version v1.1), a profile based RNA structure search program that can detect RNA pseudoknots in genomes. It has a filtering function for search speed-up and comes with the options of automatic (HMM) filter selection and manual filter selection by the user.


Link to the RNATOPS-W Server

Citation

    [Wang et al., 2009] Wang, Y., Huang, Z., Wu, Y., Malmberg, R., and Cai, L. (2009) RNATOPS-W: a web server for RNA pseudoknot search, Bioinformatics, accepted.

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